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For dm6
BigWig
Peak-call (q < 1E-05)
Peak-call (q < 1E-10)
Peak-call (q < 1E-20)
For dm3
BigWig
Peak-call (q < 1E-05)
Peak-call (q < 1E-10)
Peak-call (q < 1E-20)
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For dm6
Colocalization
Target Genes (TSS ± 1kb)
Target Genes (TSS ± 5kb)
Target Genes (TSS ± 10kb)
For dm3
Colocalization
Target Genes (TSS ± 1kb)
Target Genes (TSS ± 5kb)
Target Genes (TSS ± 10kb)
Download
For dm6
BigWig
Peak-call (q < 1E-05)
Peak-call (q < 1E-10)
Peak-call (q < 1E-20)
For dm3
BigWig
Peak-call (q < 1E-05)
Peak-call (q < 1E-10)
Peak-call (q < 1E-20)
Link Out
Sequence Read Archive
DBCLS SRA
NCBI SRA
ENA
Antigen: Su(var)205
wikigenes
PDBj
CellType: Ovary
ATCC
MeSH
RIKEN BRC
SRX15206446
GSM6122845: w1118 HP1-ChIP biological replicate 1; Drosophila melanogaster; ChIP-Seq
Sample information curated by ChIP-Atlas
Antigen
Antigen Class
TFs and others
Antigen
Su(var)205
Cell type
Cell type Class
Adult
Cell type
Ovary
NA
NA
Attributes by original data submitter
Sample
source_name
ovary
tissue
ovary
genotype
w1118;;;
antibody
anti-HP1 antibody (DSHB C1A9)
Sequenced DNA Library
library_name
GSM6122845
library_strategy
ChIP-Seq
library_source
GENOMIC
library_selection
ChIP
library_construction_protocol
Chromatin immunoprecipitation (ChIP) was carried out according to Lee et al. (2006) ChIP-seq libraries were prepared using the NEB Next Ultra II DNA Library for Illumina (NEB).
Sequencing Platform
instrument_model
Illumina NovaSeq 6000
Where can I get the processing logs?
Read processing pipeline
log
dm6
Number of total reads
11302710
Reads aligned (%)
85.2
Duplicates removed (%)
73.1
Number of peaks
2556 (qval < 1E-05)
dm3
Number of total reads
11302710
Reads aligned (%)
85.6
Duplicates removed (%)
70.5
Number of peaks
3543 (qval < 1E-05)
Base call quality data from
DBCLS SRA